Strengthening Regional Capacity for Antimicrobial Resistance (AMR) Surveillance: A One Health Training Workshop Integrating Molecular and Genomic Approaches

20 – 23 July 2026, Kigali, Rwanda

Organiser:

Jean Paul Nshizirungu (University of Rwanda, College of Science and Technology, Kigali, Rwanda)

Deadline for receipt of applications:
20 June 2026
Call for applications now closed

Antimicrobial resistance (AMR) is a pressing global health challenge that requires urgent and coordinated action. Current AMR surveillance in Rwanda and the region relies largely on phenotypic testing, which, while useful, cannot identify specific resistance genes or mutations. To enhance surveillance precision and response effectiveness, there is a critical need to strengthen capacity in molecular and genomic approaches. In response, a specialized workshop is being organized to strengthen regional AMR surveillance by equipping scientists and public health professionals with advanced skills in molecular diagnostics and genomic analysis.

The workshop will offer hands-on training in state-of-the-art techniques for detecting and characterizing AMR genes, combining theoretical and practical sessions. It leverages the expertise of the ICGEB and its partners in AMR research, bioinformatics, and molecular diagnostics, while utilizing existing scientific infrastructure in Rwanda. By building local and regional technical capacity, the workshop aims to improve the accuracy, timeliness, and impact of AMR surveillance systems.

A core component of the training is the One Health approach, emphasizing the interconnectedness of human, animal, and environmental health in the spread of AMR. This aligns with national and regional health priorities and supports the goals of the recent MoU between ICGEB and Rwandan institutions, reinforcing collaborative efforts to strengthen public health systems.

The workshop will equip participants with up-to-date tools to monitor emerging resistance threats. It also aims to catalyze future collaborations, promote knowledge sharing, and foster regional networks. While primarily targeting ICGEB member states, the workshop welcomes participants from other countries, promoting inclusivity and offering an opportunity to showcase ICGEB’s work, potentially encouraging future partnerships and membership expansion.

Topics

1. AMR Overview: Global, Regional, and National Context

  • Introduction to AMR: National, Regional, and Global Perspectives
  • Mechanisms, Drivers, and Impact of AMR
  • Weapons/Strategies to Combat AMR

2. AMR Surveillance and Data Management

  • Data Collection and Analysis for AMR Surveillance

3. Molecular and Genomic Approaches to AMR Detection

  • Omics and Molecular Biology Techniques
  • Theory Session: Introduction to Genomics & Sequencing Technologies

4. Practical Laboratory Training

  • Practical Session on: DNA Extraction & PCR
  • Practical Session on: Gel Electrophoresis, Reading Using Gel Doc, and Interpretation

5. Bioinformatics and Genomic Data Analysis

  • Bioinformatics Analysis of AMR Genes (Consensus Sequence, BLAST, Phylogenetic Analysis)

6. One Health Integration and Research Dissemination

  • One Health Approach to AMR Surveillance
  • Presentation/Poster Session: Ongoing or Published Research on AMR in Rwanda

7. Collaboration, Networking & Future Directions

  • Networking and Collaboration to Draft Proposals on Priority Pathogens (WHO List)
  • Visit to the Labs of Institutions with MoU with ICGEB in Rwanda (UR, RBC, FDA, Forensic)

Participants

Young scientists from ICGEB member countries, particularly in Africa. Eligible applicants include microbiologists, laboratory scientists, epidemiologists, pharmacists, veterinarians, animal health p rofessionals, policymakers, public health stakeholders, and MSc or PhD.Participants should have the background in microbiology, molecular biology, or related fields and strong interest on AMR.

Funding

Few grants will be available for selected nationals of ICGEB member states residing outside of Rwanda, covering airfare (Economy Class), accommodation, a registration fee waiver, and hospitality during the workshop. For local participants, the grant will cover registration fees, lunch, accommodation, and transport.

When applying to attend this event, you will be asked to uplaod “A personal description” in which you are asked to include the following points:

1. Your Professional Anchor:

– Full Name (name and surname) & Current Position: Your official role and title.

– Your Background/Current Focus: A brief, two-sentences summary of what you do or what you’re focused on right now.

– Institution & Department: Where you work.

– Geographic Location: Your city and country, to emphasize the “regional” aspect.

2. Your Current Role in the AMR Landscape:

– Direct Description of Your Work: What do you do with AMR in your current job/research?

– Specify the Sector (One Health Pillar): Explicitly state which pillar of the “One Health” triad you work in.

3. Your Motivation & Specific Learning Goals

– The “Gap” in Your Current Work: What is the limitation of your current methods?

– The Specific Workshop Skills You Want: Name the techniques from the workshop title/description you want to learn.

4. Your Intended Application

– How will you use these skills after the workshop? Be concrete. – What You Hope to Contribute: This shows you’re thinking collaboratively.

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