INFECTIOUS DISEASES / Virology
Research Interests
Arboviral pathogenesis, vector biology, virus-host interactions, virology, Molecular epidemiology, emerging infectious diseases.
Description of Research
The Vector Borne Diseases Group, led by Dr. Sujatha Sunil, investigates the molecular, viral, vector, and epidemiological mechanisms that underpin arboviral infections, with primary focus on chikungunya and dengue viruses — and an expanding interest in Zika and Chandipura viruses.
At the molecular level, the group studies virus–host and virus–vector interactions, identifying viral and cellular factors that modulate replication, immune evasion, and disease progression. Using molecular virology, functional genomics, small RNA biology, and reverse genetics, the laboratory has characterised host regulatory networks, the role of microRNAs in vector immunity, and viral RNAi suppressors that shape pathogenesis in both the human host and the mosquito vector.
Complementing this, the group conducts vector biology studies to characterise Aedes mosquito populations across India, assessing their competence, genetic diversity, and role in virus transmission and maintenance. These studies bridge laboratory and field biology to understand how mosquito physiology and genetics influence transmission efficiency.
The group also integrates molecular epidemiology and climate analysis to examine how environmental factors — temperature, rainfall, and humidity — affect mosquito vectorial capacity, virus evolution, and disease dynamics, with the aim of developing predictive models for arboviral outbreak risk under changing climate conditions.
Through this multidisciplinary framework, Dr. Sunil’s group translates fundamental discoveries into diagnostics, therapeutics, and strategies that strengthen preparedness for emerging vector-borne diseases.

Recent publications
Srivastava P, Mishra N, Dubey SK, Shrinet J, Chaudhary S, Kumar R, Kumar A, Malhotra S, Mano M, Braga L, Varma B, Giacca M, Sunil S. Dual Regulatory Role of hsa-miR-122b-5p in Chikungunya Virus Infection via Interaction with CHIKV 3′-UTR and HDAC4 Modulation. J Virol. 2025. https://doi.org/10.1128/jvi.02118-24.
Hasan A, Sharma G, Majumder N, Chaudhary S, Mehta D, Vaishya R, Ghosh S and Sunil S. Global proteome analysis of a three-dimensional human chondrocyte cell culture system infected with chikungunya virus (CHIKV) reveals distinct immune and inflammatory signatures. ACS Omega. 2025. DOI: 10.1021/acsomega.5c02832.
Mishra N1,2, Chaudhary Y1#, Chaudhary S1, Singh A1, Sunil S*1. Proteomic Analysis of CHIKV nsP3-Host Interactions in Liver Cells Identifies Novel Interacting Partners. Int. J. Mol. Sci. 2025. 26(14), 6832; https://doi.org/10.3390/ijms26146832
Babu N, Jayaram A, Shetty U, Varamballi P, Mudgal PP, Suri V, Singh MP, Kamaljeet, Agrawal S, Kaneria M, Kini S, Dey A, Das DS, Mahilkar S, Mathur G, Kumar SP, Singh S, Pani SS, Chattopadhyay S, Sunil S, Mishra B, Shastri JS, Ratho RK, Jagadesh A. Clinical epidemiology of chikungunya outbreaks in India between 2019 – 2022. Scientific Reports. (2025) 15:27280
Verma DK, Chaudhary S, Sunil S. Investigation of endocytic pathways during entry of RNA viruses revealed novel host proteins as lipid raft dependent endocytosis mediators. 2025. Virology. 608, 110531.
Mathur G, Mahilkar S and Sunil S. Generation and characterization of infectious clones of chikungunya virus from an Indian strain as a resource towards chikungunya vaccine research. 2025. Virus Research. 356, 199571.



