Archive of Kirill's Paper of the Week - 2008
by Kirill Degtyarenko
Last modified: Wed Jan 7 12:26:52 GMT 2009
19 December 2008.
12 December 2008.
5 December 2008.
28 November 2008.
Ollivier, P.R.L., Bahrou, A.S., Marcus, S., Cox, T., Church, T.M. and Hanson, T.E.
Volatilization and precipitation of tellurium by aerobic, tellurite-resistant marine
Appl. Environ. Microbiol. 74, 7163-7173.
21 November 2008.
Pompidor, G., Maillard, A.P., Girard, E., Gambarelli, S., Kahn, R. and
Covès, J. (2008)
X-ray structure of the metal-sensor CnrX in both the apo- and copper-bound
FEBS Lett. 582, 3954-3958.
14 November 2008.
7 November 2008.
Tucker, N.P., Hicks, M.G., Clarke, T.A., Crack, J.C., Chandra, G.,
Le Brun, N.E., Dixon, R. and Hutchings, M.I. (2008)
The transcriptional repressor protein NsrR senses nitric oxide directly via a
PLoS ONE 3, e3623.
17 October 2008.
10 October 2008.
Palm, G.J., Lederer, T., Orth, P., Saenger, W., Takahashi, M., Hillen, W. and Hinrichs, W.
Specific binding of divalent metal ions to tetracycline and to the Tet repressor/tetracycline
J. Biol. Inorg. Chem. 13, 1097-1110.
3 October 2008.
Gold, B., Deng, H., Bryk, R., Vargas, D., Eliezer, D., Roberts, J., Jiang, X. and Nathan, C.
Identification of a copper-binding metallothionein in pathogenic mycobacteria.
Nature Chem. Biol. 4, 609-616.
26 September 2008.
Strycharz, S.M., Woodard, T.L., Johnson, J.P., Nevin, K.P., Sanford, R.A.,
Löffler, F.E. and Lovley, D.R. (2008)
Graphite electrode as a sole electron donor for reductive dechlorination
of tetrachlorethene by Geobacter lovleyi.
Appl. Environ. Microbiol. 74, 5943-5947.
19 September 2008.
12 September 2008.
5 September 2008.
29 August 2008.
Levin, E.J., Elsen, N.L., Seder, K.D., McCoy, J.G., Fox, B.G. and
Phillips, G.N., Jr. (2008)
X-ray structure of a soluble Rieske-type ferredoxin from Mus musculus.
Acta Crystallogr. D64, 933-940.
15 August 2008.
Kulp, T.R., Hoeft, S.E., Asao, M., Madigan, M.T., Hollibaugh, J.T.,
Fisher, J.C., Stolz, J.F., Culbertson, C.W., Miller, L.G. and Oremland, R.S.
Arsenic(III) fuels anoxygenic photosynthesis in hot spring biofilms from
Mono Lake, California.
Science 321, 967-970.
8 August 2008.
1 August 2008.
25 July 2008.
Langkilde, A., Kristensen, S.M., Lo Leggio, L., Mølgaard, A.,
Jensen, J.H., Houk, A.R., Navarro Poulsen, J.-C., Kauppinen, S. and Larsen, S.
Short strong hydrogen bonds in proteins: a case study of rhamnogalacturonan
Acta Crystallogr. D64, 851-863.
18 July 2008.
11 July 2008.
Jormakka, M., Yokoyama, K., Yano, T., Tamakoshi, M., Akimoto, S.,
Shimamura, T., Curmi, P. and Iwata, S. (2008)
Molecular mechanism of energy conservation in polysulfide respiration.
Nature Structural & Molecular Biology 15, 730-737.
4 July 2008.
27 June 2008.
20 June 2008.
13 June 2008.
6 June 2008.
Aragão, D., Mitchell, E.P., Frazão, C.F., Carrondo, M.A. and Lindley, P.F. (2008)
Structural and functional relationships in the hybrid cluster protein family:
structure of the anaerobically purified hybrid cluster protein from
Desulfovibrio vulgaris at 1.35 Å resolution.
Acta Crystallogr. D64, 665-674.
30 May 2008.
23 May 2008.
Regulski, E.E., Moy, R.H., Weinberg, Z., Barrick, J.E., Yao, Z., Ruzzo, W.L. and
Breaker, R.R. (2008)
A widespread riboswitch candidate that controls bacterial genes involved in molybdenum
cofactor and tungsten cofactor metabolism.
Mol. Microbiol. 68, 918-932.
16 May 2008.
Maeda, K., Henbest, K.B., Cintolesi, F., Kuprov, I., Rodgers, C.T.,
Liddell, P.A., Gust, D., Timmel, C.R. and Hore, P.J. (2008)
Chemical compass model of avian magnetoreception.
Nature 453, 387-390.
2 May 2008.
25 April 2008.
18 April 2008.
11 April 2008.
Zou, P., Groves, M.R., Viale-Bouroncle, S.D. and Orué Lucana, D.O. (2008)
Crystallization and preliminary characterization of a novel haem-binding
protein of Streptomyces reticuli.
Acta Crystallogr. F64.
28 March 2008.
21 March 2008.
14 March 2008.
7 March 2008.
29 February 2008.
22 February 2008.
8 February 2008.
1 February 2008.
25 January 2008.
Frith, M.C., Valen, E., Krogh, A., Hayashizaki, Y., Carninci, P. and
Sandelin, A. (2008)
A code for transcription initiation in mammalian genomes.
Genome Res. 18, 1-12.
18 January 2008.
Visit Déjà vu,
the duplicate citation database.
Errami, M., Hicks, J.M., Fisher, W., Trusty, D., Wren, J.D., Long, T.C.
and Garner, H.R. (2008)
Déjà vu - a study of duplicate citations in Medline.
Bioinformatics 24, 243-249.
11 January 2008.
The event-annotated corpus and the annotation guidelines are made publicly available in XML at
the homepage of GENIA Project.
4 January 2008.
Lemaster, D.M., Anderson, J.S., Wang, L., Guo, Y., Li, H. and Hernandez, G. (2008)
NMR and X-ray analysis of structural additivity in metal binding site-swapped hybrids of
BMC Struct. Biol. 7, 81.
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