Archive of Kirill's Paper of the Week - 2000
By Kirill Degtyarenko
Last modified: Mon Aug 2 09:50:48 BST 2004
22 December 2000.
- Muñoz, A., Petering, D.H. and Shaw, C.F. III (2000)
Structure-reactivity relationships among metallothionein three-metal domains:
role of non-cysteine amino acid residues in lobster metallothionein and human
Inorg. Chem. 39, 6114-6123.
15 December 2000.
- Von Dreele, R.B., Stephens, P.W., Smith, G.D. and Blessing, R.H. (2000)
The first protein crystal structure determined from high-resolution X-ray
powder diffraction data: a variant of T3R3 human
insulin-zinc complex produced by grinding.
Acta Crystallogr. D56, 1549-1553.
8 December 2000.
- Torres, J., Kukol, A. and Arkin, I.T. (2000)
Use of a single glycine residue to determine the tilt and orientation of a
transmembrane helix. A new structural label for infrared spectroscopy.
Biophys. J. 79, 3139-3143.
1 December 2000.
- Hammarberg, T., Provost, P., Persson, B. and Radmark, O. (2000)
The N-terminal domain of 5-lipoxygenase binds calcium and mediates calcium
stimulation of enzyme activity.
J. Biol. Chem. 275, 38787-38793.
24 November 2000.
- Sharath, A.N., Weinhold, E. and Bhagwat, A.S. (2000)
Reviving a dead enzyme: cytosine deaminations promoted by an inactive DNA
methyltransferase and an S-adenosylmethionine analogue.
Biochemistry 39, 14611-14616.
17 November 2000.
- Timmerman, P., Jolliffe, K.A., Calama, M.C., Weidmann, J.-L., Prins, L.J.,
Cardullo, F., Snellink-Ruël, B.H.M., Fokkens, R.H., Nibbering, N.M.M.,
Shinkai, S. and Reinhoudt, D.N. (2000)
Ag+ labeling: a convenient new tool for the characterization of
hydrogen-bonded supramolecular assemblies by MALDI-TOF mass spectrometry.
Chem. Eur. J. 6, 4104-4115.
10 November 2000.
After a very long break, let's start again...
6 October 2000.
- Moënne-Loccoz, P., Richter, O.-M.H., Huang, H.-w., Wasser, I.M.,
Ghiladi, R.A., Karlin, K.D. and de Vries, S. (2000)
Nitric oxide reductase from Paracoccus denitrificans contains an
oxo-bridged heme/non-heme diiron center.
J. Am. Chem. Soc. 122, 9344-9345.
29 September 2000.
- Costa, M., Michel, F. and Westhof, E. (2000)
A three-dimensional perspective on exon binding by a group II self-splicing
EMBO J. 19, 5007-5018.
22 September 2000.
15 September 2000.
8 September 2000.
- Gebbink, R.J.M.K., Klink, S.I., Feiters, M.C. and Nolte, R.J.M. (2000)
Fe4S4 clusters functionalized with molecular receptor
Eur. J. Inorg. Chem., 2087-2099.
1 September 2000.
- George, G.N., Pickering, I.J., Yu, E.Y., Prince, R.C., Bursakov, S.A.,
Gavel, O.Yu., Moura, I. and Moura, J.J.G. (2000)
A novel protein-bound copper-molybdenum cluster.
J. Am. Chem. Soc. 122, 8321-8322.
Postulated structure for the
cluster of the orange protein from Desulfovibrio gigas.
25 August 2000.
Also see a comment:
18 August 2000.
Also see a comment:
Ban, N., Nissen, P., Hansen, J., Moore, P.B. and Steitz, T.A. (2000)
The complete atomic structure of the large ribosomal subunit at 2.4 Å
Science 289, 905-920.
Nissen, P., Hansen, J., Ban, N., Moore, P.B. and Steitz, T.A. (2000)
The structural basis of ribosome activity in peptide bond synthesis.
Science 289, 905-920.
11 August 2000.
- Jovine, L., Djordjevic, S. and Rhodes, D. (2000)
The crystal structure of yeast phenylalanine tRNA at 2.0 Å resolution:
cleavage by Mg2+ in 15-year old crystals.
J. Mol. Biol. 301, 401-414.
4 August 2000.
The binding of benzohydroxamic acid to class III plant peroxidases yields
hexacoordinate quantum mechanically admixed
S = 5/2 and S = 3/2
state never observed in haem proteins before.
- Indiani, C., Feis, A., Howes, B.D., Marzocchi, M.P. and Smulevich, G. (2000)
Benzohydroxamic acid-peroxidase complexes: spectroscopic characterization of a
novel heme spin species.
J. Am. Chem. Soc. 122, 7368-7376.
21 July 2000.
14 July 2000.
Also see a comment:
7 July 2000.
30 June 2000.
- Selzer, T., Albeck, S. and Schreiber, G. (2000)
Rational design of faster associating and tighter binding protein complexes.
Nature Struct. Biol. 7, 537-541.
23 June 2000.
Prokaryotic enzymes fold faster!
16 June 2000.
- Tolbert, T.J. and Wong, C.-H. (2000)
Intein-mediated synthesis of proteins containing carbohydrates and other
J. Am. Chem. Soc. 122, 5421-5428.
9 June 2000.
2 June 2000.
- Kolbe, M., Besir, H., Essen, L.-O. and Oesterhelt, D. (2000)
Structure of the light-driven chloride pump halorhodopsin at 1.8 Å
Science 288, 1390-1396.
26 May 2000.
- Chiu, M.L., Nollert, P., Loewen, M.C., Belrhali, H., Pebay-Peyroula, E.,
Rosenbuscha, J.P. and Landau, E.M. (2000)
Crystallization in cubo: general applicability to membrane proteins.
Acta Crystallogr. D56, 781-784.
19 May 2000.
- Kumaran, S., Datta, D. and Roy, R.P. (2000)
An enigmatic peptide ligation reaction: Protease-catalyzed oligomerization of a
native protein segment in neat aqueous solution.
Protein Science 9, 734-741.
12 May 2000.
- Wagenknecht, H.-A., Stemp, E.D.A. and Barton, J.K. (2000)
DNA-bound peptide radicals generated through DNA-mediated electron transport.
Biochemistry 39, 5483-5491.
5 May 2000.
- Douglas, T. and Stark, V.T. (2000)
Nanophase cobalt oxyhydroxide mineral synthesized within the protein cage.
Inorg. Chem. 39, 1828-1830.
21 April 2000.
- Moore, B., Persson, B.C., Nelson, C.C., Gesteland, R.F. and Atkins, J.F.
Quadruplet codons: implications for code expansion and the specification of
translation step size.
J. Mol. Biol. 298, 195-209.
14 April 2000.
7 April 2000.
Geyer, A. and Frank Moser, F. (2000)
Eur. J. Org. Chem., 1113-1120.
31 March 2000.
24 March 2000.
Brown, K., Tegoni, M., Prudêncio, M., Pereira, A.S., Besson, S.,
Moura, J.J.G., Moura, I. and Cambillau, C. (2000)
A novel type of catalytic copper cluster in nitrous oxide reductase.
Nature Struct. Biol. 7, 191-195.
17 March 2000.
Why Viking 1976 Mars missions failed to find organic molecules on the Martian
10 March 2000.
The Space Shuttle brought back some beautiful crystals.
- Broutin-L'Hermite, I., Ries-Kautt, M. and Ducruix, A. (2000)
1.7 Å X-ray structure of space-grown collagenase crystals.
Acta Crystallogr. D56, 376-378.
3 March 2000.
25 February 2000.
- McMillan, K., Adler, M., Auld, D.S., Baldwin, J.J., Blasko, E.,
Browne, L.J., Chelsky, D., Davey, D., Dolle, R.E., Eagen, K.A., Erickson, S.,
Feldman, R.I., Glaser, C.B., Mallari, C., Morrissey, M.M., Ohlmeyer, M.H.J.,
Pan, G., Parkinson, J.F., Phillips, G.B., Polokoff, M.A., Sigal, N.H.,
Vergona, R., Whitlow, M., Young, T.A. and Devlin, J.J. (2000)
Allosteric inhibitors of inducible nitric oxide synthase dimerization
discovered via combinatorial chemistry.
Proc. Natl. Acad. Sci. USA 97, 1506-1511.
18 February 2000.
- Hollfelder, F., Kirby, A.J., Tawfik, D.S., Kikuchi, K. and Hilvert, D.
Characterization of proton-transfer catalysis by serum albumins.
J. Am. Chem. Soc. 122, 1022-1029.
11 February 2000.
Zhang, Z., Ren, J., Stammers, D.K., Baldwin, J.E., Harlos, K. and
Schofield, C.J. (2000)
Structural origins of the selectivity of the trifunctional oxygenase clavaminic
Nature Struct. Biol. 7, 127-133.
4 February 2000.
- Croney, J.C., Helms, M.K., Jameson, D.M. and Larsen, R.W. (2000)
Temperature dependence of photoinduced electron transfer within self-assembled
uroporphyrin-cytochrome c complexes.
J. Phys. Chem. B104, 1088-1096.
28 January 2000.
- Weik, M., Ravelli, R.B.G., Kryger, G., McSweeney, S., Raves, M.L.,
Harel, M., Gros, P., Silman, I., Kroon, J. and Sussman, J.L. (2000)
Specific chemical and structural damage to proteins produced by synchrotron
Proc. Natl. Acad. Sci. USA 97, 623-628.
21 January 2000.
- Korenberg, M., Solomon, J.E. and Regelson, M.E. (2000)
Parallel cascade identification as a means for automatically classifying
protein sequences into structure/function groups.
Biol. Cybernetics 82, 15-21.
14 January 2000.
In contrast to other known ferritins, that have 24 subunits, the
Listeria ferritin has 12 subunits. The ferroxidase site is not contained
within a four-helix bundle but situated at the interface of two different
Ilari, A., Stefanini, S., Chiancone, E. and Tsernoglou, D. (2000)
The dodecameric ferritin from Listeria innocua contains a novel
intersubunit iron-binding site.
Nature Struct. Biol. 7, 38-43.
7 January 2000.
- Wang, C.C.-Y., Ho, D.M. and Groves, J.T. (1999)
Models of nitric oxide synthase: iron(III) porphyrin-catalyzed oxidation of
fluorenone oxime to nitric oxide and fluorenone.
J. Am. Chem. Soc. 121, 12094-12103.
Kirill's Paper of the Week
Kirill's Paper of the Week - 1999
Kirill's Paper of the Week - 1998
Kirill's Paper of the Week - 1997
Kirill's Paper of the Week - 1996
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