Accession numbers for bacterial P450 sequences

Compiled by David R. Nelson [Nelson et al. (1996) Pharmacogenetics 6, 1-42]

Updated by Kirill Degtyarenko

Last modified: Thu Apr 15 16:53:30 BST 2004

For a list of corresponding EC numbers, click here.

CYP101
CYP102 NADPH:P450 reductases
CYP103
CYP104
CYP105A CYP105B CYP105C CYP105D CYP105E
CYP106A
CYP107A CYP107B CYP107C CYP107D CYP107E CYP107F CYP107G
CYP108
CYP109
CYP110
CYP111
CYP112
CYP113A CYP113B
CYP114
CYP115
CYP116
CYP117
CYP118
CYP119
CYP120
CYP121
CYP122A
CYP123
CYP124
CYP125
CYP126
CYP127
CYP128
CYP129
CYP130
CYP131A
CYP132
Species abbreviations


P450 enzymes constitute a superfamily of haem-thiolate proteins, widely distributed in bacteria, fungi, plants and animals. The enzymes are involved in metabolism of a plethora of both exogenous and endogenous compounds. Usually, they act as terminal oxidases in multicomponent electron transfer chains, called here P450-containing monooxygenase systems.


                                                                           
 Gene   Species      PIR     SwissProt       GenBank/EMBL/DDBJ            PRF   
                                                                                
CYP51     Mtu                  P77901  Z80226

CYP101    Psp  A25660          P00183  M12546  D00528                  0805198A
                                                                       1202319A

CYP102    Bme  A34286          P14779  J04832                          1510269A
CYP102    Bsu                  O08336  U93874
                               O08394  D87979

CYP103    Atu  A32306          P24466  M19352                          1513282A

CYP104    Atu  B32306          P24467  M19352                          1513282B

CYP105A1  Sgl  A35401          P18326  M32238                          1613247A
CYP105A2  Aau  S47520          Q59079  D26543                          2019246A

CYP105B1  Sgl  B35401          P18327  M32239                          1613247B

CYP105C1  Str  S15809          P23296  M31939                          1613258A

CYP105D1  Stg  S24750          P26911  X63601  S45823                  1819469A

CYP105E1  Rfa  A55578          P46373  Z29635                          2011281A

CYP105?   Amo                  P96562  U84350

CYP106A1  Bme  S07764          P14762  X16610                          1603257A
CYP106A2  Bme  S32215  S39924  Q06069  Z21972                          2009359A

CYP107A1  Ser  S18531          Q00441  M54983  X60379                  1804331B

CYP107B1  Ser  B42606          P33271  M83110                          1807212B

CYP107C1  Stt                  Q60005  D30759  M80346                  2019205B

CYP107D1  San                  Q59819  L37200

CYP107E1  Mgr                  Q59523  D16098                          2106351A

CYP107F1  Stg                  Q59915  D45916                          2117310A

CYP107G1  Shy                  Q54302  X86780 

CYP107H1  Bsu                  P53554  U51868

CYP108    Pse  A42971  S27653  P33006  M91440                          1817293A

CYP109    Bsu                  P27632  M36988                          1710173A

CYP110A1  Ana  C37842          P29980  M38044                          1704222C
CYP110A2  Ava                  Q59163  U38478

CYP111    Pse  A48495          Q59723  L23310                          1921246A

CYP112    Bja                  Q59203  U12678  L02323  L12971         

CYP113A1  Ser  B40634          P48635  L05776                          1907186A

CYP113B1  Sfr                  Q59910  U08223                          2018284A

CYP114    Bja                  Q59204  U12678  L02323  L12971         

CYP115P   Bja                          U12678  L02323  L12971         

CYP116    Rho                  P43492  U17130                          2104333G

CYP117    Bja                  Q59205  U12678

CYP118    Mle                          L04666

CYP119    Sso                  Q55080  U51337

CYP120    Syn                  Q59990  D64003

CYP121    Mtu                  Q59571  Z77163

CYP122A1  Str                  P77977  U65940
CYP122A2  Shy                  Q59921  X86780

CYP123    Mtu                  P77902  Z80226

CYP124    Mtu                  Q50696  Z77163

CYP125    Mtu                  P71856  Z82098

CYP126    Mtu                  P77903  Z80226

CYP127    Rhi                  Q53215  Z68203

CYP128    Mtu                  Q59572  Z77163

CYP129    Str                  Q59971  U50973

CYP130    Mtu                  Q11062  Z77137

CYP131A1  Spe                  Q54823  L47164
CYP131A2  Str                  Q55218  L35154

CYP132    Mtu                  P77900  Z80108

CYP?      Sca  JC4287          Q59831  D30815                          2121309A

CYP?      Mtu                  P95099  Z83866

CYP?      Mtu                  P96813  Z92770

CYP?      Mtu                  O08362  Z95150

CYP?      Mtu                  O08447  Z96800

CYP?      Mtu                  O08464  Z97193

CYP?      Bsu                  O08469  Y11043  U93876

We use combined listing of GenBank, EMBL and DDBJ accession numbers because they use common numbering.

Some sequences can be identified from N-terminal sequences as belonging to a subfamily. These have been included in the listing of the subfamily even though it is premature to assign a specific number to these sequences.

Pfam family: PF00067


Species abbreviations


Aau = Amycolata autotrophica
Amo = Amycolatopsis orientalis
Ana = Anabaena species
Atu = Agrobacterium tumefaciens
Ava = Anabaena variabilis
Bja = Bradyrhizobium japonicum
Bme = Bacillus megaterium
Bsu = Bacillus subtilis
Mgr = Micromonospora griseorubida
Mle = Mycobacterium leprae
Mtu = Mycobacterium tuberculosis
Pse = Pseudomonas species
Psp = Pseudomonas putida
Rfa = Rhodococcus fascians
Rhi = Rhizobium species
Rho = Rhodococcus species
San = Streptomyces antibioticus
Sca = Streptomyces carbophilus
Ser = Saccharopolyspora erythraea
Sfr = Streptomyces fradiae
Sgl = Streptomyces griseolus
Shy = Streptomyces hygroscopicus
Spe = Streptomyces peucetius
Sso = Sulfolobus solfataricus
Stg = Streptomyces griseus
Str = Streptomyces species
Stt = Streptomyces thermotolerans
Syn = Synechocystis sp.


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