Selected references on 3D structures
By Kirill Degtyarenko
Last modified: Thu Apr 15 13:28:57 BST 2004
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Argos, P. and Mathews, F.S. (1975)
The structure of
ferrocytochrome
b5 at 2.8 Å resolution.
J. Biol. Chem. 250, 747-751.
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Correll, C.C., Batie, C.J., Ballou, D.P. and Ludwig, M.L. (1992)
Phthalate dioxygenase
reductase: a modular structure for electron transfer from pyridine
nucleotides to [2Fe-2S].
Science 258, 1604-1610.
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Cupp-Vickery, J.R. and Poulos, T.L. (1995)
Structure of
cytochrome P450eryF involved in erythromycin biosynthesis.
Nature Struct. Biol. 2, 144-153.
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Cupp-Vickery, J.R. and Poulos, T.L. (1997)
Structure of
cytochrome P450eryF: Substrate, inhibitors, and model compounds bound in
the active site.
Steroids 62, 112-116.
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Djordjevic, S., Roberts, D.L., Wang, M., Shea, T., Camitta, M.G.W.,
Masters, B.S.S. and Kim, J.-J.P. (1995)
Crystallization and preliminary x-ray studies of NADPH-cytochrome
P450 reductase.
Proc. Natl. Acad. Sci. USA 92, 3214-3218.
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Guiles, R.D., Altman, J., Kuntz, I.D., Waskell, L. and Lipka, J.J. (1990)
Structural studies of cytochrome b5:
Complete sequence-specific resonance assignments for the
trypsin-solubilized microsomal ferrocytochrome b5
obtained from pig and calf.
Biochemistry 29, 1276-1289.
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Hasemann, C.A., Ravichandran, K.G., Peterson, J.A. and Deisenhofer, J.
(1994)
Crystal structure and refinement of
cytochrome
P450terp at 2.3 Å resolution.
J. Mol. Biol. 236, 1169-1185.
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Karplus, P.A., Daniels, M.J. and Herriott, J.R. (1991)
Atomic structure of
ferredoxin-NADP+
reductase: prototype for a structurally novel flavoenzyme family.
Science 251, 60-66.
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Kim, J.-J.P., Roberts, D.L., Djordjevic, S., Wang, M., Shea, T.M. and
Masters, B.S.S. (1996)
Crystallization studies of NADPH-cytochrome P450 reductase.
Methods Enzymol. 272, 368-377.
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Kuriyan, J., Krishna, T.S.R., Wong, L., Guenther, B., Pahler, A.,
Williams, C.H., Jr. and Model, P. (1991)
Convergent evolution of similar function in two structurally divergent enzymes.
Nature 352, 172-174.
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Li, H. and Poulos, T.L. (1997)
The structure of the cytochrome P450BM-3 haem domain complexed with the fatty
acid substrate, palmitoleic acid.
Nature Struct. Biol. 4, 140-146.
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Lu, G., Campbell, W.H., Schneider, G. and Lindqvist, Y. (1994)
Crystal structure of the
FAD-containing
fragment of corn nitrate reductase at 2.5 Å resolution: relationship
to other flavoprotein reductases.
Structure 2, 809-821.
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Lyons, T.A., Ratnaswamy, G. and Pochapsky, T.C. (1996)
Redox-dependent dynamics of putidaredoxin characterized by amide proton
exchange.
Protein Science 5, 627-639.
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Miura, S. and Ichikawa, Y. (1991)
Proton nuclear magnetic resonance investigation of adrenodoxin. Assignment of
aromatic resonances and evidence for a conformational similarity with
ferredoxin from
Spirulina platensis.
Eur. J. Biochem. 197, 747-757.
- Muskett, F.W., Kelly, G.P. and Whitford, D. (1996)
The solution structure of bovine ferricytochrome b5
determined using heteronuclear NMR methods.
J. Mol. Biol. 258, 172-189.
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Nakahara, K., Shoun, H., Adachi, S.-i., Iizuka, T. and Shiro, Y. (1994)
Crystallization and preliminary X-ray diffraction studies of nitric oxide
reductase
cytochrome P450nor from Fusarium oxysporum.
J. Mol. Biol. 239, 158-159.
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Nishida, H., Inaka, K., Yamanaka, M., Kaida, S., Kobayashi, K. and Miki, K.
(1995)
Crystal structure of
NADH-cytochrome b5 reductase from pig liver at
2.4 Å resolution.
Biochemistry 34, 2763-2767.
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Park, S.-Y., Shimizu, H., Adachi, S.-i., Nakagawa, A., Tanaka, I.,
Nakahara, K., Shoun, H., Obayashi, E., Nakamura, H., Iizuka, T. and Shiro, Y.
(1997)
Crystal structure of nitric oxide reductase from denitrifying fungus
Fusarium oxysporum.
Nature Struct. Biol. 4, 827-832.
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Pochapsky, T.C., Ye, X.M., Ratnaswamy, G. and Lyons, T.A. (1994)
An NMR-derived model for the solution structure of oxidized
putidaredoxin, a 2-Fe,
2-S ferredoxin from Pseudomonas.
Biochemistry 33, 6424-6432.
- Pochapsky, T.C., Jain, N.U., Kuti, M., Lyons, T.A. and Heymont, J. (1999)
A refined model for the solution structure of oxidized
putidaredoxin.
Biochemistry 38, 4681-4690.
[Electronic Supplementary Material]
- Podust, L.M., Poulos, T.L. and Waterman, M.R. (2001)
Crystal structure of cytochrome P450
14
-sterol demethylase (CYP51) from
Mycobacterium tuberculosis in complex with azole inhibitors.
Proc. Natl. Acad. Sci. USA 98, 3068-3073.
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Poulos, T.L., Finzel, B.C. and Howard, A.J. (1987)
High-resolution crystal structure of
cytochrome P450cam.
J. Mol. Biol. 195, 687-700.
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Ravichandran, K.G., Boddupalli, S.S., Hasemann, C.A., Peterson, J.A. and
Deisenhofer, J. (1993)
Crystal structure of
hemoprotein domain of P450BM-3, a prototype for microsomal P450's.
Science 261, 731-736.
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Sery, A., Housset, D., Serre, L., Bonicel, J., Hatchikian, C., Frey, M. and
Roth, M. (1994)
Crystal structure of the
ferredoxin I from Desulfovibrio africanus at 2.3 Å resolution.
Biochemistry 33, 15408-15417.
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Sevrioukova, I.F., Li, H., Zhang, H., Peterson, J.A. and Poulos, T.L. (1999)
Structure of a cytochrome P450-redox partner electron-transfer
complex.
Proc. Natl. Acad. Sci. USA 96, 1863-1868.
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Tegoni, M. and Cambillau, C. (1994)
Structural studies on recombinant and point mutants of flavocytochrome
b2.
Biochimie 76, 501-514.
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Veitch, N.C., Concar, D.W., Williams, R.J.P. and Whitford, D. (1988)
Investigation of the solution structures and mobility of oxidised and reduced
cytochrome b5 by 2D NMR spectroscopy.
FEBS Lett. 238, 49-55.
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Wang, M., Roberts, D.L., Paschke, R., Shea, T.M., Masters, B.S.S. and
Kim, J.-J.P. (1997)
Three-dimensional structure of NADPH-cytochrome P450 reductase:
Prototype for FMN- and FAD-containing enzymes.
Proc. Natl. Acad. Sci. USA 94, 8411-8416.
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Williams, P.A., Cosme, J., Sridhar, V., Johnson, E.F. and McRee, D.E. (2000)
Mammalian microsomal cytochrome P450 monooxygenase: Structural adaptations for
membrane binding and functional diversity.
Molecular Cell 5, 121-131.
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Xia, Z.X. and Mathews, F.S. (1990)
Molecular structure of
flavocytochrome b2 at 2.4 Å resolution.
J. Mol. Biol. 212, 837-863.
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Zhao, Q., Modi, S., Smith, G., Paine, M., McDonagh, P.D., Wolf, C.R., Tew, D.,
Lian, L.-Y., Roberts, G.C.K. and Driessen, H.P.C. (1999)
Crystal structure of the FMN-binding domain of human cytochrome P450
reductase at 1.93 Åresolution.
Protein Science 8, 298-306.
- Ziegler, G.A. and Schulz, G.E. (2000)
Crystal structures of adrenodoxin reductase in complex with NADP+
and NADPH suggesting a mechanism for the electron transfer of an enzyme family.
Biochemistry 39, 10986-10995.
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Ziegler, G.A., Vonrhein, C., Hanukoglu, I. and Schulz, G.E. (1999)
The structure of adrenodoxin reductase of mitochondrial P450 systems:
Electron transfer for steroid biosynthesis.
J. Mol. Biol. 289, 981-990.
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